Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| f0f1 atp synthase subunit gamma | E9D03_RS12045 | Not Available | Positive | 2590713 - 2591576 | 31579.3 |
| f0f1 atp synthase subunit beta | E9D03_RS12050 | Not Available | Positive | 2591603 - 2592985 | 50328.5 |
| f0f1 atp synthase subunit epsilon | E9D03_RS12055 | Not Available | Positive | 2593006 - 2593425 | 15069.2 |
| bifunctional udp-n-acetylglucosamine diphosphorylase/glucosamine-1-phosphate n-acetyltransferase glmu | E9D03_RS12060 | Not Available | Positive | 2593777 - 2595147 | 49163.1 |
| glutamine--fructose-6-phosphate transaminase (isomerizing) | E9D03_RS12065 | Not Available | Positive | 2595309 - 2597138 | 66912.4 |
| long polar fimbria major subunit lpfa2 | E9D03_RS12070 | Not Available | Positive | 2597838 - 2598440 | 20889.2 |
| fimbria/pilus periplasmic chaperone | E9D03_RS12075 | Not Available | Positive | 2598601 - 2598927 | 12311.1 |
| fimbrial protein | E9D03_RS12080 | Not Available | Positive | 2599074 - 2599229 | 5687.04 |
| fimbrial biogenesis outer membrane usher protein | E9D03_RS12085 | Not Available | Positive | 2599251 - 2601785 | 94350.7 |
| fimbrial protein | E9D03_RS12090 | Not Available | Positive | 2601797 - 2602837 | 36753.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




