Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribose operon transcriptional repressor rbsr | E9D03_RS11945 | Not Available | Negative | 2569759 - 2570751 | 36614.1 |
| ribokinase | E9D03_RS11950 | Not Available | Negative | 2570755 - 2571684 | 32292.4 |
| ribose abc transporter substrate-binding protein rbsb | E9D03_RS11955 | Not Available | Negative | 2571810 - 2572700 | 30940.2 |
| ribose abc transporter permease | E9D03_RS11960 | Not Available | Negative | 2572725 - 2573690 | 33454.0 |
| ribose abc transporter atp-binding protein rbsa | E9D03_RS11965 | Not Available | Negative | 2573695 - 2575200 | 55018.9 |
| d-ribose pyranase | E9D03_RS11970 | Not Available | Negative | 2575208 - 2575627 | 15293.4 |
| low affinity potassium transporter kup | E9D03_RS11975 | Not Available | Negative | 2575794 - 2577662 | 69355.4 |
| atpase rava | E9D03_RS11980 | Not Available | Positive | 2577885 - 2579381 | 56391.1 |
| atpase rava stimulator viaa | E9D03_RS11985 | Not Available | Positive | 2579375 - 2580826 | 55896.6 |
| aspartate--ammonia ligase | E9D03_RS11990 | Not Available | Negative | 2580831 - 2581823 | 36651.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




