Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| haaap family serine/threonine permease | E9D03_RS11845 | Not Available | Positive | 2548288 - 2549577 | 46909.2 |
| l-serine ammonia-lyase ii | E9D03_RS11850 | Not Available | Positive | 2549635 - 2551002 | 48672.8 |
| flap endonuclease xni | E9D03_RS11855 | Not Available | Positive | 2551024 - 2551869 | 31500.9 |
| lactaldehyde reductase | E9D03_RS11860 | Not Available | Negative | 2551924 - 2553072 | 40515.7 |
| l-fuculose-phosphate aldolase | E9D03_RS11865 | Not Available | Negative | 2553100 - 2553747 | 23786.7 |
| l-fucose:h+ symporter permease | E9D03_RS11870 | Not Available | Positive | 2554294 - 2555610 | 47577.6 |
| l-fucose isomerase | E9D03_RS11875 | Not Available | Positive | 2555643 - 2557418 | 64966.2 |
| l-fuculokinase | E9D03_RS11880 | Not Available | Positive | 2557527 - 2558945 | 52259.7 |
| l-fucose mutarotase | E9D03_RS11885 | Not Available | Positive | 2558947 - 2559369 | 15474.0 |
| l-fucose operon activator | E9D03_RS11890 | Not Available | Positive | 2559427 - 2560158 | 27349.7 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




