Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-ser | Not Available | Not Available | Positive | 2439931 - 2440023 | Not Available |
| carbon storage regulator csra | E9D03_RS11330 | Not Available | Negative | 2440339 - 2440524 | 6856.34 |
| alanine--trna ligase | E9D03_RS11335 | Not Available | Negative | 2440759 - 2443389 | 96037.9 |
| recombination regulator recx | E9D03_RS11340 | Not Available | Negative | 2443517 - 2444017 | 19411.1 |
| recombinase reca | E9D03_RS11345 | Not Available | Negative | 2444085 - 2445146 | 37975.6 |
| nicotinamide-nucleotide amidase | E9D03_RS11350 | Not Available | Negative | 2445226 - 2445723 | 17539.6 |
| lytic murein transglycosylase b | E9D03_RS11355 | Not Available | Negative | 2445868 - 2446953 | 40328.1 |
| pts glucitol/sorbitol transporter subunit iia | E9D03_RS11370 | Not Available | Positive | 2448739 - 2449110 | 13306.8 |
| sorbitol-6-phosphate dehydrogenase | E9D03_RS11375 | Not Available | Positive | 2449114 - 2449893 | 27841.5 |
| transcriptional regulator gutm | E9D03_RS11380 | Not Available | Positive | 2449999 - 2450358 | 12926.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




