Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar efflux transporter setb | E9D03_RS00280 | Not Available | Positive | 57340 - 58521 | 42692.5 |
| ykgj family cysteine cluster protein | E9D03_RS00285 | Not Available | Negative | 58518 - 58772 | 8954.96 |
| elongation factor p-like protein yeip | E9D03_RS00290 | Not Available | Positive | 58927 - 59499 | 21547.9 |
| mannitol dehydrogenase family protein | E9D03_RS00295 | Not Available | Positive | 59722 - 61188 | 53945.7 |
| Ncrna_class:other | Not Available | Not Available | Positive | 60279 - 60462 | Not Available |
| gtp-binding protein | E9D03_RS00300 | Not Available | Positive | 61306 - 62292 | 36026.2 |
| Ncrna_class:antisense_rna | Not Available | Not Available | Positive | 61461 - 61568 | Not Available |
| kdo(2)-lipid a phosphotransferase | E9D03_RS00305 | Not Available | Positive | 62331 - 63044 | 26760.7 |
| bifunctional murein dd-endopeptidase/murein ld-carboxypeptidase | E9D03_RS00310 | Not Available | Positive | 63457 - 64023 | 21041.1 |
| cyclic di-gmp phosphodiesterase | E9D03_RS00315 | Not Available | Positive | 64204 - 65760 | 58530.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




