Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ni(ii)/co(ii) efflux transporter accessory subunit rcnb | E9D03_RS10810 | Not Available | Negative | 2329784 - 2330122 | 12482.8 |
| nickel/cobalt efflux protein rcna | E9D03_RS10815 | Not Available | Negative | 2330340 - 2331185 | 31379.1 |
| ni(ii)/co(ii)-binding transcriptional repressor rcnr | E9D03_RS10820 | Not Available | Positive | 2331306 - 2331578 | 10134.5 |
| outer membrane protein | E9D03_RS10825 | Not Available | Negative | 2331688 - 2332002 | 11622.0 |
| hypothetical protein | E9D03_RS10830 | Not Available | Negative | 2332012 - 2332359 | 12515.9 |
| transcription factor | E9D03_RS10835 | Not Available | Negative | 2333410 - 2333649 | 8940.83 |
| hydroxyethylthiazole kinase | E9D03_RS10840 | Not Available | Positive | 2333983 - 2334771 | 27356.7 |
| bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | E9D03_RS10845 | Not Available | Positive | 2334768 - 2335568 | 28619.2 |
| glycosyl hydrolase 25 family protein | E9D03_RS10850 | Not Available | Positive | 2335633 - 2336451 | 31570.6 |
| gntr family transcriptional regulator | E9D03_RS10855 | Not Available | Positive | 2336503 - 2337249 | 28278.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




