Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dini family protein | E9D03_RS10695 | Not Available | Negative | 2297725 - 2297973 | 9379.12 |
| two-component regulatory system sensor histidine kinase btss | E9D03_RS10705 | Not Available | Positive | 2298488 - 2300173 | 62109.4 |
| two-component system response regulator btsr | E9D03_RS10710 | Not Available | Positive | 2300170 - 2300889 | 27401.4 |
| duf1456 family protein | E9D03_RS10715 | Not Available | Positive | 2300936 - 2301406 | 18003.9 |
| yehr family lipoprotein | E9D03_RS10720 | Not Available | Negative | 2301448 - 2301909 | 16595.0 |
| dipeptidase | E9D03_RS10725 | Not Available | Negative | 2302034 - 2304037 | 73694.2 |
| vwa domain-containing protein | E9D03_RS10730 | Not Available | Negative | 2304034 - 2305170 | 42153.7 |
| hypothetical protein | E9D03_RS10735 | Not Available | Negative | 2305163 - 2305894 | 26394.8 |
| hypothetical protein | E9D03_RS10740 | Not Available | Negative | 2305913 - 2307442 | 56149.9 |
| moxr family atpase | E9D03_RS10745 | Not Available | Negative | 2307453 - 2308541 | 39686.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




