Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cu(+)/ag(+) efflux rnd transporter outer membrane channel cusc | E9D03_RS10645 | Not Available | Negative | 2283203 - 2284585 | 50717.8 |
| copper response regulator transcription factor cusr | E9D03_RS10650 | Not Available | Positive | 2284742 - 2285425 | 25396.1 |
| cu(+)/ag(+) sensor histidine kinase cuss | E9D03_RS10655 | Not Available | Positive | 2285415 - 2286863 | 53955.5 |
| type vi secretion system tip protein vgrg | E9D03_RS10660 | Not Available | Positive | 2287457 - 2289358 | 71456.1 |
| dcrb-related protein | E9D03_RS10665 | Not Available | Positive | 2289386 - 2289847 | 17335.4 |
| type iv secretion protein rhs | E9D03_RS10670 | Not Available | Positive | 2289867 - 2294717 | 179223.0 |
| hypothetical protein | E9D03_RS10675 | Not Available | Positive | 2294735 - 2295142 | 15881.3 |
| rhs repeat protein | E9D03_RS10680 | Not Available | Positive | 2295311 - 2296645 | 50617.3 |
| hypothetical protein | E9D03_RS10685 | Not Available | Positive | 2296684 - 2296893 | 7953.64 |
| transposase family protein | E9D03_RS10690 | Not Available | Positive | 2297108 - 2297312 | 7859.46 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




