Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i toxin-antitoxin system hok family toxin | E9D03_RS10595 | Not Available | Negative | 2272355 - 2272507 | 5604.08 |
| glutamate--cysteine ligase | E9D03_RS10600 | Not Available | Positive | 2272946 - 2274064 | 41686.7 |
| duf1158 domain-containing protein | E9D03_RS10605 | Not Available | Positive | 2274130 - 2274378 | 9403.99 |
| mmcq/yjbr family dna-binding protein | E9D03_RS10610 | Not Available | Positive | 2274443 - 2274811 | 14051.1 |
| oxygen-insensitive nad(p)h nitroreductase | E9D03_RS10615 | Not Available | Positive | 2274905 - 2275558 | 23860.3 |
| mechanosensitive ion channel family protein | E9D03_RS10620 | Not Available | Positive | 2275666 - 2276913 | 46614.5 |
| phenylalanine transporter | E9D03_RS10625 | Not Available | Negative | 2276981 - 2278357 | 50675.3 |
| cu(+)/ag(+) efflux rnd transporter permease subunit cusa | E9D03_RS10630 | Not Available | Negative | 2278459 - 2281596 | 114545.0 |
| cu(+)/ag(+) efflux rnd transporter periplasmic adaptor subunit cusb | E9D03_RS10635 | Not Available | Negative | 2281608 - 2282831 | 44325.4 |
| cu(+)/ag(+) efflux rnd transporter periplasmic metallochaperone cusf | E9D03_RS10640 | Not Available | Negative | 2282847 - 2283179 | 12213.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




