Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ybed family protein | E9D03_RS10345 | Not Available | Positive | 2218846 - 2219109 | 9827.92 |
| lipoyl(octanoyl) transferase lipb | E9D03_RS10350 | Not Available | Positive | 2219210 - 2219851 | 23884.0 |
| dna-binding transcriptional regulator | E9D03_RS10355 | Not Available | Positive | 2220111 - 2221064 | 35867.4 |
| lipoyl synthase | E9D03_RS10360 | Not Available | Positive | 2221273 - 2222238 | 36073.8 |
| twin-arginine translocase subunit tate | E9D03_RS10365 | Not Available | Negative | 2222339 - 2222542 | 7024.71 |
| deaminated glutathione amidase | E9D03_RS10370 | Not Available | Negative | 2222671 - 2223459 | 28683.0 |
| fluoride efflux transporter crcb | E9D03_RS10375 | Not Available | Positive | 2223552 - 2223935 | 13766.1 |
| transcription antiterminator/rna stability regulator cspe | E9D03_RS10380 | Not Available | Negative | 2223989 - 2224198 | 7463.84 |
| phospholipid:lipid a palmitoyltransferase | E9D03_RS10385 | Not Available | Negative | 2224373 - 2224933 | 21798.7 |
| anaerobic c4-dicarboxylate transporter dcuc | E9D03_RS10390 | Not Available | Positive | 2225522 - 2226907 | 48415.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




