Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| galactose/glucose abc transporter substrate-binding protein mglb | E9D03_RS00180 | Not Available | Negative | 32901 - 33899 | 35744.5 |
| hth-type transcriptional regulator gals | E9D03_RS00185 | Not Available | Negative | 34178 - 35218 | 37419.1 |
| duf418 family protein | E9D03_RS00190 | Not Available | Negative | 35360 - 36517 | 43371.2 |
| gtp cyclohydrolase i fole | E9D03_RS00195 | Not Available | Negative | 36534 - 37202 | 24832.1 |
| s-formylglutathione hydrolase yeig | E9D03_RS00200 | Not Available | Positive | 37460 - 38296 | 31330.0 |
| catecholate siderophore receptor cira | E9D03_RS00205 | Not Available | Negative | 38328 - 40307 | 73386.9 |
| lysine-specific permease | E9D03_RS00210 | Not Available | Negative | 40599 - 42068 | 53565.0 |
| lysr family transcriptional regulator | E9D03_RS00215 | Not Available | Negative | 42273 - 43154 | 32725.7 |
| yeih family protein | E9D03_RS00220 | Not Available | Positive | 43253 - 44302 | 36884.3 |
| deoxyribonuclease iv | E9D03_RS00225 | Not Available | Positive | 44376 - 45233 | 31481.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




