Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cidb/lrgb family autolysis modulator | E9D03_RS00140 | Not Available | Positive | 24570 - 25265 | 24437.0 |
| cytidine deaminase | E9D03_RS00145 | Not Available | Positive | 25395 - 26279 | 31542.6 |
| outer membrane permeability protein sana | E9D03_RS00150 | Not Available | Positive | 26429 - 27148 | 27288.5 |
| Ncrna_class:other | Not Available | Not Available | Positive | 26675 - 26806 | Not Available |
| Ncrna_class:other | Not Available | Not Available | Positive | 26853 - 26984 | Not Available |
| duf2542 family protein | E9D03_RS00155 | Not Available | Positive | 27151 - 27390 | 9264.61 |
| nad-dependent dihydropyrimidine dehydrogenase subunit pret | E9D03_RS00160 | Not Available | Positive | 27584 - 28822 | 44368.2 |
| nad-dependent dihydropyrimidine dehydrogenase subunit prea | E9D03_RS00165 | Not Available | Positive | 28816 - 30051 | 45071.4 |
| galactose/methyl galactoside abc transporter permease mglc | E9D03_RS00170 | Not Available | Negative | 30294 - 31304 | 35508.4 |
| galactose/methyl galactoside abc transporter atp-binding protein mgla | E9D03_RS00175 | Not Available | Negative | 31320 - 32840 | 56418.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




