Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| quinate/shikimate dehydrogenase | E9D03_RS09630 | Not Available | Positive | 2071371 - 2072237 | 31227.7 |
| type i 3-dehydroquinate dehydratase | E9D03_RS09635 | Not Available | Positive | 2072268 - 2073026 | 27491.3 |
| acetate coa-transferase ydif | E9D03_RS09640 | Not Available | Positive | 2073171 - 2074766 | 57507.6 |
| acyl-coa dehydrogenase | E9D03_RS09645 | Not Available | Positive | 2074780 - 2075931 | 43004.6 |
| arac family transcriptional regulator | E9D03_RS09650 | Not Available | Negative | 2075974 - 2076885 | 34877.2 |
| electron transfer flavoprotein | E9D03_RS09655 | Not Available | Positive | 2077201 - 2077965 | 27404.0 |
| electron transfer flavoprotein subunit alpha | E9D03_RS09660 | Not Available | Positive | 2077985 - 2078923 | 33819.7 |
| fad-dependent oxidoreductase | E9D03_RS09665 | Not Available | Positive | 2078979 - 2080268 | 45911.7 |
| ferredoxin family protein | E9D03_RS09670 | Not Available | Positive | 2080265 - 2080558 | 10685.7 |
| medium-chain fatty-acid--coa ligase | E9D03_RS09675 | Not Available | Positive | 2080561 - 2082261 | 62797.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




