Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent helicase | E9D03_RS09425 | Not Available | Positive | 2026683 - 2031299 | 169404.0 |
| monothiol glutaredoxin 4 | E9D03_RS09430 | Not Available | Negative | 2031350 - 2031697 | 12879.5 |
| c40 family peptidase | E9D03_RS09435 | Not Available | Positive | 2032032 - 2032847 | 29948.2 |
| superoxide dismutase | E9D03_RS09440 | Not Available | Positive | 2032975 - 2033556 | 21266.8 |
| mfs transporter | E9D03_RS09445 | Not Available | Negative | 2033702 - 2034871 | 40037.7 |
| stress response protein ynhf | E9D03_RS09450 | Not Available | Negative | 2035037 - 2035126 | 2997.87 |
| hth-type transcriptional repressor purr | E9D03_RS09455 | Not Available | Positive | 2035425 - 2036450 | 38177.0 |
| lysr family transcriptional regulator | E9D03_RS09460 | Not Available | Negative | 2036447 - 2037379 | 35251.9 |
| bcr/cfla family multidrug efflux mfs transporter | E9D03_RS09465 | Not Available | Positive | 2037492 - 2038703 | 43430.0 |
| cyclopropane fatty acyl phospholipid synthase | E9D03_RS09470 | Not Available | Positive | 2038994 - 2040142 | 43927.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




