Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| endonuclease iii | E9D03_RS09325 | Not Available | Positive | 2009120 - 2009755 | 23593.7 |
| dipeptide/tripeptide permease dtpa | E9D03_RS09330 | Not Available | Positive | 2010366 - 2011868 | 54008.4 |
| glutathione transferase gsta | E9D03_RS09335 | Not Available | Positive | 2011974 - 2012579 | 22869.6 |
| pyridoxal kinase pdxy | E9D03_RS09340 | Not Available | Negative | 2012623 - 2013483 | 31218.9 |
| tyrosine--trna ligase | E9D03_RS09345 | Not Available | Negative | 2013545 - 2014819 | 47529.6 |
| pyridoxamine 5'-phosphate oxidase | E9D03_RS09350 | Not Available | Negative | 2014948 - 2015604 | 25562.6 |
| c-type lysozyme inhibitor | E9D03_RS09355 | Not Available | Negative | 2015663 - 2015992 | 12568.2 |
| anhydro-n-acetylmuramic acid kinase | E9D03_RS09360 | Not Available | Negative | 2016090 - 2017199 | 39530.7 |
| outer membrane lipoprotein slyb | E9D03_RS09365 | Not Available | Positive | 2017472 - 2017939 | 15602.7 |
| transcriptional regulator slya | E9D03_RS09370 | Not Available | Negative | 2017986 - 2018420 | 16354.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




