Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yeah/yhbh family protein | E9D03_RS09225 | Not Available | Negative | 1990146 - 1991429 | 49453.2 |
| protein kinase yeag | E9D03_RS09230 | Not Available | Negative | 1991542 - 1993476 | 74484.3 |
| mipa/ompv family protein | E9D03_RS09235 | Not Available | Positive | 1993912 - 1994658 | 27804.3 |
| methylglyoxal reductase yeae | E9D03_RS09240 | Not Available | Positive | 1994748 - 1995602 | 31030.5 |
| d-hexose-6-phosphate mutarotase | E9D03_RS09245 | Not Available | Negative | 1995653 - 1996537 | 32774.0 |
| glyceraldehyde-3-phosphate dehydrogenase | E9D03_RS09250 | Not Available | Negative | 1996621 - 1997616 | 35534.5 |
| peptide-methionine (r)-s-oxide reductase msrb | E9D03_RS09255 | Not Available | Positive | 1997958 - 1998371 | 15452.0 |
| yeac family protein | E9D03_RS09260 | Not Available | Positive | 1998413 - 1998685 | 10273.4 |
| oxidoreductase | E9D03_RS09265 | Not Available | Positive | 1999055 - 2000131 | 38715.9 |
| mfs transporter | E9D03_RS09270 | Not Available | Positive | 2000158 - 2001537 | 49629.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




