Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcription antiterminator/rna stability regulator cspe | E9D03_RS09020 | Not Available | Positive | 1952724 - 1952933 | 7402.76 |
| 23s rrna (guanine(745)-n(1))-methyltransferase | E9D03_RS09025 | Not Available | Positive | 1953099 - 1953908 | 30469.7 |
| manganese efflux pump mntp | E9D03_RS09030 | Not Available | Negative | 1953905 - 1954471 | 20118.3 |
| duf986 domain-containing protein | E9D03_RS09035 | Not Available | Negative | 1954901 - 1955359 | 17644.4 |
| pts mannose transporter subunit iid | E9D03_RS09040 | Not Available | Negative | 1955414 - 1956265 | 30957.4 |
| pts mannose/fructose/sorbose transporter subunit iic | E9D03_RS09045 | Not Available | Negative | 1956278 - 1957078 | 27637.6 |
| pts mannose transporter subunit iiab | E9D03_RS09050 | Not Available | Negative | 1957141 - 1958112 | 35049.6 |
| cnnm family cation transport protein yoae | E9D03_RS09055 | Not Available | Positive | 1958575 - 1960131 | 56531.5 |
| eal domain-containing protein | E9D03_RS09060 | Not Available | Negative | 1960135 - 1961733 | 59747.0 |
| l-serine ammonia-lyase | E9D03_RS09065 | Not Available | Negative | 1961864 - 1963228 | 48939.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




