Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gaf domain-containing protein | E9D03_RS08970 | Not Available | Positive | 1944031 - 1944528 | 18080.5 |
| rna chaperone proq | E9D03_RS08975 | Not Available | Positive | 1944625 - 1945323 | 25835.9 |
| carboxy terminal-processing peptidase | E9D03_RS08980 | Not Available | Positive | 1945343 - 1947391 | 76637.3 |
| protease htpx | E9D03_RS08985 | Not Available | Positive | 1947583 - 1948464 | 31959.3 |
| mfs transporter | E9D03_RS08990 | Not Available | Negative | 1948510 - 1949883 | 48150.7 |
| dna-binding transcriptional regulator kdgr | E9D03_RS08995 | Not Available | Positive | 1950060 - 1950851 | 30031.1 |
| hypothetical protein | E9D03_RS09000 | Not Available | Negative | 1950995 - 1951234 | 8586.73 |
| phop/phoq regulator mgrb | E9D03_RS09005 | Not Available | Positive | 1951394 - 1951537 | 5552.09 |
| hypothetical protein | E9D03_RS09010 | Not Available | Positive | 1951612 - 1951899 | 10807.1 |
| yobf family protein | E9D03_RS09015 | Not Available | Positive | 1952568 - 1952711 | 5212.44 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




