Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase iii subunit theta | E9D03_RS08920 | Not Available | Negative | 1934820 - 1935050 | 8846.79 |
| copc domain-containing protein yoba | E9D03_RS08925 | Not Available | Positive | 1935189 - 1935563 | 13499.1 |
| copper homeostasis membrane protein copd | E9D03_RS08930 | Not Available | Positive | 1935567 - 1936439 | 32585.4 |
| yeby family protein | E9D03_RS08935 | Not Available | Positive | 1936452 - 1936793 | 12379.2 |
| protein-serine/threonine phosphatase | E9D03_RS08940 | Not Available | Positive | 1937189 - 1937845 | 25392.4 |
| yebw family protein | E9D03_RS08945 | Not Available | Negative | 1937846 - 1938121 | 10443.4 |
| duf1480 family protein | E9D03_RS08950 | Not Available | Negative | 1938142 - 1938378 | 8753.26 |
| 16s rrna (cytosine(1407)-c(5))-methyltransferase rsmf | E9D03_RS08955 | Not Available | Negative | 1938496 - 1939935 | 53265.3 |
| lipid-binding membrane homeostasis protein yebt | E9D03_RS08960 | Not Available | Negative | 1940016 - 1942649 | 95019.1 |
| membrane integrity lipid transport subunit yebs | E9D03_RS08965 | Not Available | Negative | 1942618 - 1943901 | 48276.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




