Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Tail component | E9D03_RS23930 | Not Available | Positive | 4989574 - 4989941 | 13690.1 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 4233 - 4348 | Not Available |
| glycine betaine abc transporter permease yehy | E9D03_RS00050 | Not Available | Negative | 4829 - 5986 | 41206.3 |
| glycine betaine abc transporter substrate-binding protein osmf | E9D03_RS00055 | Not Available | Negative | 5993 - 6910 | 32709.1 |
| beta-glucosidase bglx | E9D03_RS00060 | Not Available | Negative | 7162 - 9459 | 83492.8 |
| d-lactate dehydrogenase | E9D03_RS00065 | Not Available | Positive | 9655 - 11370 | 64689.0 |
| d-alanyl-d-alanine endopeptidase | E9D03_RS00070 | Not Available | Negative | 11408 - 12340 | 33855.3 |
| yip1 family protein | E9D03_RS00075 | Not Available | Negative | 12514 - 13101 | 21692.0 |
| deda family protein | E9D03_RS00080 | Not Available | Positive | 13271 - 13849 | 21436.9 |
| sdr family oxidoreductase | E9D03_RS00085 | Not Available | Negative | 13979 - 14740 | 26967.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




