Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxy-tetrahydrodipicolinate synthase | E9D03_RS08370 | Not Available | Positive | 1829215 - 1830093 | 31285.9 |
| outer membrane protein assembly factor bamc | E9D03_RS08375 | Not Available | Positive | 1830110 - 1831144 | 36826.4 |
| phosphoribosylaminoimidazolesuccinocarboxamide synthase | E9D03_RS08380 | Not Available | Positive | 1831357 - 1832070 | 26996.5 |
| neutral zinc metallopeptidase | E9D03_RS08385 | Not Available | Positive | 1832238 - 1833101 | 31462.0 |
| trna(met) cytidine acetyltransferase | E9D03_RS08390 | Not Available | Positive | 1833116 - 1835131 | 74795.5 |
| esterase | E9D03_RS08395 | Not Available | Positive | 1835205 - 1835903 | 24801.4 |
| ypfn family protein | E9D03_RS08400 | Not Available | Negative | 1835984 - 1836184 | 8071.78 |
| succinyl-diaminopimelate desuccinylase | E9D03_RS08405 | Not Available | Negative | 1836212 - 1837339 | 41243.3 |
| arsc family reductase | E9D03_RS08410 | Not Available | Negative | 1837343 - 1837699 | 13500.3 |
| protein ypfm | E9D03_RS08415 | Not Available | Positive | 1838080 - 1838139 | 2408.02 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




