Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoribosylformylglycinamidine cyclo-ligase | E9D03_RS08265 | Not Available | Negative | 1806692 - 1807729 | 36852.2 |
| uracil phosphoribosyltransferase | E9D03_RS08270 | Not Available | Positive | 1808054 - 1808680 | 22534.6 |
| uracil permease | E9D03_RS08275 | Not Available | Positive | 1808766 - 1810055 | 45063.0 |
| dnaa inactivator hda | E9D03_RS08280 | Not Available | Positive | 1810105 - 1810851 | 28371.4 |
| arsenate reductase (glutaredoxin) | E9D03_RS08285 | Not Available | Negative | 1810989 - 1811348 | 13417.4 |
| beta-barrel assembly-enhancing protease | E9D03_RS08290 | Not Available | Negative | 1811369 - 1812832 | 53938.1 |
| ai-2e family transporter | E9D03_RS08295 | Not Available | Positive | 1813045 - 1814106 | 39196.9 |
| formate transporter | E9D03_RS08300 | Not Available | Negative | 1814144 - 1814992 | 30532.3 |
| sigma-54-dependent fis family transcriptional regulator | E9D03_RS08305 | Not Available | Negative | 1815014 - 1817026 | 75356.7 |
| hydrogenase 4 assembly chaperone hyfj | E9D03_RS08310 | Not Available | Negative | 1817056 - 1817469 | 15592.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




