Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Bacteriophage major capsid protein | E9D03_RS23765 | Not Available | Positive | 4964725 - 4964991 | 10294.7 |
| Major tail protein v | E9D03_RS23770 | Not Available | Positive | 4964973 - 4965532 | 20113.3 |
| Head-tail joining protein | E9D03_RS23890 | Not Available | Positive | 4984045 - 4984164 | 4493.25 |
| Tail component | E9D03_RS23895 | Not Available | Positive | 4984179 - 4984712 | 20382.6 |
| Tail component | E9D03_RS23900 | Not Available | Positive | 4984709 - 4985104 | 14649.9 |
| Major tail protein v | E9D03_RS23905 | Not Available | Positive | 4985112 - 4985852 | 25762.0 |
| Tail component | E9D03_RS23910 | Not Available | Positive | 4985868 - 4986290 | 15535.3 |
| Tail component | E9D03_RS23915 | Not Available | Positive | 4986272 - 4986706 | 16092.0 |
| Tail component | E9D03_RS23920 | Not Available | Positive | 4986699 - 4989248 | 91865.3 |
| Tail component | E9D03_RS23925 | Not Available | Positive | 4989245 - 4989574 | 12458.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




