Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta hydrolase | E9D03_RS08065 | Not Available | Negative | 1759324 - 1760178 | 31444.6 |
| inositol-1-monophosphatase | E9D03_RS08070 | Not Available | Negative | 1760323 - 1761126 | 29173.8 |
| trna (cytosine(32)/uridine(32)-2'-o)-methyltransferase trmj | E9D03_RS08075 | Not Available | Positive | 1761245 - 1761982 | 26920.4 |
| fe-s cluster assembly transcriptional regulator iscr | E9D03_RS08080 | Not Available | Positive | 1762283 - 1762771 | 17337.6 |
| cysteine desulfurase | E9D03_RS08085 | Not Available | Positive | 1762883 - 1764097 | 45092.2 |
| fe-s cluster assembly scaffold iscu | E9D03_RS08090 | Not Available | Positive | 1764125 - 1764511 | 13849.3 |
| iron-sulfur cluster assembly protein isca | E9D03_RS08095 | Not Available | Positive | 1764528 - 1764851 | 11556.7 |
| co-chaperone hscb | E9D03_RS08100 | Not Available | Positive | 1764947 - 1765462 | 20138.8 |
| fe-s protein assembly chaperone hsca | E9D03_RS08105 | Not Available | Positive | 1765479 - 1767329 | 65656.3 |
| isc system 2fe-2s type ferredoxin | E9D03_RS08110 | Not Available | Positive | 1767331 - 1767666 | 12331.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




