Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldose 1-epimerase | E9D03_RS08015 | Not Available | Positive | 1749880 - 1750752 | 32658.1 |
| doxx family protein | E9D03_RS08020 | Not Available | Negative | 1750800 - 1751222 | 15198.3 |
| phenylpropionate dioxygenase ferredoxin reductase subunit | E9D03_RS08025 | Not Available | Negative | 1751319 - 1752521 | 43908.5 |
| 3-phenylpropionate-dihydrodiol/cinnamic acid-dihydrodiol dehydrogenase | E9D03_RS08030 | Not Available | Negative | 1752531 - 1753343 | 28441.2 |
| bifunctional 3-phenylpropionate/cinnamic acid dioxygenase ferredoxin subunit | E9D03_RS08035 | Not Available | Negative | 1753340 - 1753660 | 11329.3 |
| 3-phenylpropionate/cinnamic acid dioxygenase subunit beta | E9D03_RS08040 | Not Available | Negative | 1753660 - 1754178 | 20527.3 |
| 3-phenylpropionate/cinnamic acid dioxygenase subunit alpha | E9D03_RS08045 | Not Available | Negative | 1754175 - 1755536 | 51111.8 |
| dna-binding transcriptional regulator hcar | E9D03_RS08050 | Not Available | Positive | 1755672 - 1756562 | 32812.2 |
| 3-phenylpropionate mfs transporter | E9D03_RS08055 | Not Available | Positive | 1756722 - 1757861 | 41623.2 |
| stationary phase inducible protein csie | E9D03_RS08060 | Not Available | Negative | 1757853 - 1759133 | 49043.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




