Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rpoe leader peptide rsed | E9D03_RS07860 | Not Available | Positive | 1714532 - 1714687 | 6229.83 |
| rna polymerase sigma factor rpoe | E9D03_RS07865 | Not Available | Positive | 1714684 - 1715259 | 21697.0 |
| anti-sigma-e factor rsea | E9D03_RS07870 | Not Available | Positive | 1715292 - 1715930 | 23839.2 |
| sigma-e factor regulatory protein rseb | E9D03_RS07875 | Not Available | Positive | 1715930 - 1716886 | 35751.8 |
| soxr-reducing system protein rsec | E9D03_RS07880 | Not Available | Positive | 1716883 - 1717362 | 16626.3 |
| elongation factor 4 | E9D03_RS07885 | Not Available | Positive | 1717560 - 1719359 | 66574.1 |
| signal peptidase i | E9D03_RS07890 | Not Available | Positive | 1719375 - 1720349 | 35948.3 |
| ribonuclease iii | E9D03_RS07895 | Not Available | Positive | 1720622 - 1721302 | 25551.6 |
| gtpase era | E9D03_RS07900 | Not Available | Positive | 1721299 - 1722204 | 33768.1 |
| dna repair protein reco | E9D03_RS07905 | Not Available | Positive | 1722216 - 1722944 | 27392.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




