Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| m48 family metallopeptidase | E9D03_RS07490 | Not Available | Positive | 1641214 - 1641717 | 19456.6 |
| vancomycin high temperature exclusion protein | E9D03_RS07495 | Not Available | Positive | 1641794 - 1642486 | 25497.3 |
| gfo/idh/moca family oxidoreductase | E9D03_RS07500 | Not Available | Positive | 1642565 - 1643551 | 36211.2 |
| terc family membrane protein alx | E9D03_RS07505 | Not Available | Positive | 1643835 - 1644800 | 35953.1 |
| serine/threonine transporter sstt | E9D03_RS07510 | Not Available | Positive | 1645199 - 1646443 | 43480.4 |
| ygjv family protein | E9D03_RS07515 | Not Available | Negative | 1646448 - 1646999 | 20590.8 |
| altronate dehydratase | E9D03_RS07520 | Not Available | Negative | 1647082 - 1648569 | 54180.3 |
| glucuronate isomerase | E9D03_RS07525 | Not Available | Negative | 1648584 - 1649996 | 53964.1 |
| mfs transporter | E9D03_RS07530 | Not Available | Positive | 1650479 - 1651777 | 46911.0 |
| transcriptional regulator exur | E9D03_RS07535 | Not Available | Positive | 1651907 - 1652683 | 29837.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




