Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s21 | E9D03_RS07390 | Not Available | Positive | 1615935 - 1616150 | 8500.42 |
| dna primase | E9D03_RS07395 | Not Available | Positive | 1616261 - 1618006 | 65568.5 |
| rna polymerase sigma factor rpod | E9D03_RS07400 | Not Available | Positive | 1618201 - 1620042 | 70211.2 |
| g/u mismatch-specific dna glycosylase | E9D03_RS07405 | Not Available | Negative | 1620121 - 1620627 | 18655.4 |
| Trna-met | Not Available | Not Available | Positive | 1620752 - 1620827 | Not Available |
| nadph-dependent ferric chelate reductase | E9D03_RS07415 | Not Available | Negative | 1620881 - 1621645 | 28859.1 |
| padr family transcriptional regulator | E9D03_RS07420 | Not Available | Positive | 1621933 - 1622556 | 23415.8 |
| methyl-accepting chemotaxis protein | E9D03_RS07425 | Not Available | Negative | 1622710 - 1624230 | 55042.0 |
| putrescine aminotransferase | E9D03_RS07430 | Not Available | Positive | 1624537 - 1626027 | 53855.5 |
| pp_01480 | E9D03_RS07435 | Not Available | Negative | 1626069 - 1626401 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




