Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3,4-dihydroxy-2-butanone-4-phosphate synthase | E9D03_RS07290 | Not Available | Negative | 1595530 - 1596183 | 23354.9 |
| accessory factor ubik family protein | E9D03_RS07295 | Not Available | Positive | 1596557 - 1596856 | 11389.7 |
| cell surface composition regulator glgs | E9D03_RS07300 | Not Available | Negative | 1596891 - 1597091 | 7922.34 |
| yqij family protein | E9D03_RS07305 | Not Available | Positive | 1597360 - 1597974 | 22489.7 |
| flotillin family protein | E9D03_RS07310 | Not Available | Positive | 1598016 - 1599677 | 60687.2 |
| type i toxin-antitoxin system ibs family toxin | E9D03_RS07315 | Not Available | Positive | 1599916 - 1599975 | 2150.99 |
| type i toxin-antitoxin system toxin ibse | E9D03_RS07320 | Not Available | Positive | 1600292 - 1600351 | 2207.06 |
| bifunctional d-glycero-beta-d-manno-heptose-7-phosphate kinase/d-glycero-beta-d-manno-heptose 1-phosphate adenylyltransferase hlde | E9D03_RS07325 | Not Available | Negative | 1600471 - 1601904 | 51067.6 |
| bifunctional | E9D03_RS07330 | Not Available | Negative | 1601952 - 1604792 | 108503.0 |
| inorganic triphosphatase | E9D03_RS07335 | Not Available | Negative | 1604815 - 1606116 | 48419.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




