Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component system response regulator qseb | E9D03_RS07185 | Not Available | Positive | 1574879 - 1575538 | 24747.2 |
| two-component system sensor histidine kinase qsec | E9D03_RS07190 | Not Available | Positive | 1575535 - 1576884 | 50261.7 |
| nadph:quinone oxidoreductase mdab | E9D03_RS07195 | Not Available | Positive | 1576994 - 1577575 | 21892.1 |
| antibiotic biosynthesis monooxygenase | E9D03_RS07200 | Not Available | Positive | 1577606 - 1577920 | 11533.1 |
| murr/rpir family transcriptional regulator | E9D03_RS07205 | Not Available | Negative | 1577965 - 1578852 | 32226.3 |
| iron-siderophore abc transporter substrate-binding protein | E9D03_RS07210 | Not Available | Negative | 1578849 - 1579796 | 34489.7 |
| iron abc transporter permease | E9D03_RS07215 | Not Available | Negative | 1579807 - 1580844 | 36574.5 |
| iron abc transporter permease | E9D03_RS07220 | Not Available | Negative | 1580853 - 1581836 | 33809.0 |
| tonb-dependent siderophore receptor | E9D03_RS07230 | Not Available | Positive | 1583016 - 1585157 | 78583.4 |
| dna topoisomerase iv subunit b | E9D03_RS07235 | Not Available | Negative | 1585221 - 1587113 | 70260.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




