Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional glutathionylspermidine amidase/synthase | E9D03_RS07030 | Not Available | Negative | 1542639 - 1544498 | 70536.7 |
| glutathione-dependent disulfide-bond oxidoreductase | E9D03_RS07035 | Not Available | Positive | 1544703 - 1545569 | 32393.4 |
| hydrogenase maturation factor hybg | E9D03_RS07040 | Not Available | Negative | 1545692 - 1545940 | 8808.67 |
| hydrogenase maturation nickel metallochaperone hypa | E9D03_RS07045 | Not Available | Negative | 1545953 - 1546294 | 12684.1 |
| hydrogenase-2 assembly chaperone | E9D03_RS07050 | Not Available | Negative | 1546287 - 1546775 | 17920.6 |
| hyad/hybd family hydrogenase maturation endopeptidase | E9D03_RS07055 | Not Available | Negative | 1546768 - 1547262 | 17724.8 |
| hydrogenase 2 large subunit | E9D03_RS07060 | Not Available | Negative | 1547262 - 1548965 | 62494.6 |
| ni/fe-hydrogenase cytochrome b subunit | E9D03_RS07065 | Not Available | Negative | 1548962 - 1550140 | 43604.6 |
| hydrogenase 2 operon protein hyba | E9D03_RS07070 | Not Available | Negative | 1550130 - 1551116 | 36005.0 |
| hydrogenase 2 small subunit | E9D03_RS07075 | Not Available | Negative | 1551119 - 1552237 | 39654.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




