Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | E9D03_RS06955 | Not Available | Positive | 1529436 - 1529795 | 13862.5 |
| aromatic amino acid transaminase | E9D03_RS06960 | Not Available | Negative | 1530134 - 1531327 | 43507.2 |
| alanine racemase | E9D03_RS06965 | Not Available | Negative | 1531580 - 1532659 | 39197.3 |
| replicative dna helicase dnab | E9D03_RS06970 | Not Available | Negative | 1532712 - 1534127 | 52409.1 |
| quinone oxidoreductase | E9D03_RS06975 | Not Available | Positive | 1534210 - 1535193 | 35174.1 |
| envelope stress response protein pspg | E9D03_RS06980 | Not Available | Negative | 1535359 - 1535601 | 9024.0 |
| trna dihydrouridine(20/20a) synthase dusa | E9D03_RS06985 | Not Available | Negative | 1535735 - 1536772 | 38571.2 |
| site-specific integrase | E9D03_RS06990 | Not Available | Positive | 1536861 - 1537958 | 41758.1 |
| dini-like family protein | E9D03_RS06995 | Not Available | Positive | 1538020 - 1538268 | 9408.14 |
| is66 family insertion sequence element accessory protein tnpb | E9D03_RS07005 | Not Available | Positive | 1538559 - 1538909 | 13118.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




