Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| heme lyase ccmf/nrfe family subunit | E9D03_RS06855 | Not Available | Negative | 1505277 - 1506995 | 63469.1 |
| cytochrome c nitrite reductase subunit nrfd | E9D03_RS06860 | Not Available | Negative | 1507015 - 1507971 | 35024.2 |
| cytochrome c nitrite reductase fe-s protein | E9D03_RS06865 | Not Available | Negative | 1507968 - 1508639 | 24568.8 |
| cytochrome c nitrite reductase pentaheme subunit | E9D03_RS06870 | Not Available | Negative | 1508636 - 1509202 | 20715.6 |
| ammonia-forming nitrite reductase cytochrome c552 subunit | E9D03_RS06875 | Not Available | Negative | 1509247 - 1510683 | 53705.7 |
| acetate--coa ligase | E9D03_RS06880 | Not Available | Positive | 1511076 - 1513034 | 72113.4 |
| duf485 domain-containing protein | E9D03_RS06885 | Not Available | Positive | 1513235 - 1513549 | 11658.3 |
| cation/acetate symporter actp | E9D03_RS06890 | Not Available | Positive | 1513546 - 1515195 | 59227.8 |
| t3ss effector pentapeptide repeat protein espx5 | E9D03_RS06895 | Not Available | Positive | 1515375 - 1516667 | 49623.3 |
| na+/h+ antiporter | E9D03_RS06900 | Not Available | Negative | 1516821 - 1518470 | 60527.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




