Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphonate metabolism protein phnp | E9D03_RS06755 | Not Available | Positive | 1481640 - 1482398 | 27899.3 |
| hypothetical protein | E9D03_RS06760 | Not Available | Negative | 1482475 - 1482804 | 13327.1 |
| response regulator | E9D03_RS06765 | Not Available | Negative | 1482873 - 1485143 | 82523.8 |
| sugar abc transporter atp-binding protein | E9D03_RS06770 | Not Available | Positive | 1485257 - 1486777 | 55191.4 |
| ribose abc transporter permease | E9D03_RS06775 | Not Available | Positive | 1486774 - 1487748 | 34011.9 |
| abc transporter substrate-binding protein | E9D03_RS06780 | Not Available | Positive | 1487767 - 1488708 | 32790.5 |
| d-lyxose/d-mannose family sugar isomerase | E9D03_RS06785 | Not Available | Positive | 1488763 - 1489446 | 25799.2 |
| ketose 1,6-bisphosphate aldolase | E9D03_RS06790 | Not Available | Positive | 1489461 - 1490321 | 31122.1 |
| carbohydrate kinase family protein | E9D03_RS06795 | Not Available | Positive | 1490318 - 1491319 | 36849.2 |
| response regulator transcription factor | E9D03_RS06800 | Not Available | Negative | 1491316 - 1492023 | 26161.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




