Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphonate metabolism transcriptional regulator phnf | E9D03_RS06705 | Not Available | Positive | 1474328 - 1475053 | 27637.1 |
| phosphonate c-p lyase system protein phng | E9D03_RS06710 | Not Available | Positive | 1475054 - 1475506 | 16538.7 |
| phosphonate c-p lyase system protein phnh | E9D03_RS06715 | Not Available | Positive | 1475503 - 1476087 | 20914.4 |
| alpha-d-ribose 1-methylphosphonate 5-triphosphate synthase subunit phni | E9D03_RS06720 | Not Available | Positive | 1476087 - 1477151 | 38975.1 |
| alpha-d-ribose 1-methylphosphonate 5-phosphate c-p-lyase phnj | E9D03_RS06725 | Not Available | Positive | 1477144 - 1477989 | 31828.9 |
| phosphonate c-p lyase system protein phnk | E9D03_RS06730 | Not Available | Positive | 1477986 - 1478744 | 27818.6 |
| phosphonate c-p lyase system protein phnl | E9D03_RS06735 | Not Available | Positive | 1478855 - 1479535 | 24695.9 |
| alpha-d-ribose 1-methylphosphonate 5-triphosphate diphosphatase | E9D03_RS06740 | Not Available | Positive | 1479532 - 1480659 | 41710.5 |
| ribose 1,5-bisphosphokinase | E9D03_RS06745 | Not Available | Positive | 1480659 - 1481216 | 20744.9 |
| aminoalkylphosphonate n-acetyltransferase | E9D03_RS06750 | Not Available | Positive | 1481213 - 1481638 | 16319.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




