Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Endopeptidase | E9D03_RS22690 | Not Available | Negative | 4795832 - 4796299 | 17098.5 |
| Lysin | E9D03_RS22695 | Not Available | Negative | 4796296 - 4796793 | 17889.5 |
| Holin protein s-like protein | E9D03_RS22700 | Not Available | Negative | 4796793 - 4797008 | 7950.74 |
| Hypothetical protein | E9D03_RS22990 | Not Available | Positive | 4839508 - 4839711 | 7455.13 |
| Putative small subunit terminase | E9D03_RS22995 | Not Available | Positive | 4839767 - 4840573 | 30459.9 |
| Putative large subunit terminase | E9D03_RS23000 | Not Available | Positive | 4840554 - 4842260 | 65263.6 |
| Putative portal protein | E9D03_RS23005 | Not Available | Positive | 4842260 - 4844404 | 81067.0 |
| Hypothetical protein | E9D03_RS23010 | Not Available | Positive | 4844562 - 4845569 | 36711.4 |
| Putative major capsid protein | E9D03_RS23015 | Not Available | Positive | 4845593 - 4846807 | 44907.6 |
| Hypothetical protein | E9D03_RS23020 | Not Available | Positive | 4846863 - 4847252 | 13505.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




