Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| small ribosomal subunit biogenesis gtpase rsga | E9D03_RS06405 | Not Available | Positive | 1406371 - 1407423 | 39181.5 |
| phosphatidylserine decarboxylase | E9D03_RS06410 | Not Available | Positive | 1407520 - 1408488 | 35936.4 |
| miniconductance mechanosensitive channel mscm | E9D03_RS06415 | Not Available | Positive | 1408510 - 1411833 | 123976.0 |
| glutamate/gamma-aminobutyrate family transporter yjem | E9D03_RS06420 | Not Available | Negative | 1411984 - 1413486 | 54693.2 |
| elongation factor p--(r)-beta-lysine ligase | E9D03_RS06425 | Not Available | Negative | 1413705 - 1414682 | 36978.1 |
| fumarate reductase (quinol) flavoprotein subunit | E9D03_RS06430 | Not Available | Positive | 1415007 - 1416815 | 65974.5 |
| succinate dehydrogenase/fumarate reductase iron-sulfur subunit | E9D03_RS06435 | Not Available | Positive | 1416808 - 1417542 | 27124.5 |
| fumarate reductase subunit frdc | E9D03_RS06440 | Not Available | Positive | 1417553 - 1417948 | 15015.8 |
| fumarate reductase subunit frdd | E9D03_RS06445 | Not Available | Positive | 1417959 - 1418318 | 13107.8 |
| blaec family class c beta-lactamase | E9D03_RS06450 | Not Available | Positive | 1418381 - 1419514 | 41533.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




