Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna (adenosine(37)-n6)-dimethylallyltransferase miaa | E9D03_RS06355 | Not Available | Negative | 1397789 - 1398739 | 35009.1 |
| dna mismatch repair endonuclease mutl | E9D03_RS06360 | Not Available | Negative | 1398732 - 1400579 | 67948.7 |
| n-acetylmuramoyl-l-alanine amidase amib | E9D03_RS06365 | Not Available | Negative | 1400589 - 1401926 | 48032.0 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex atpase subunit type 1 tsae | E9D03_RS06370 | Not Available | Negative | 1401945 - 1402406 | 16854.0 |
| bifunctional adp-dependent nad(p)h-hydrate dehydratase/nad(p)h-hydrate epimerase | E9D03_RS06375 | Not Available | Negative | 1402378 - 1403925 | 54527.4 |
| trna epoxyqueuosine(34) reductase queg | E9D03_RS06380 | Not Available | Positive | 1403924 - 1405063 | 43049.4 |
| hypothetical protein | E9D03_RS06385 | Not Available | Negative | 1405046 - 1405099 | 2056.38 |
| Trna-gly | Not Available | Not Available | Positive | 1405333 - 1405408 | Not Available |
| Trna-gly | Not Available | Not Available | Positive | 1405445 - 1405520 | Not Available |
| oligoribonuclease | E9D03_RS06400 | Not Available | Negative | 1405731 - 1406276 | 20758.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




