Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hth-type transcriptional regulator ular | E9D03_RS06255 | Not Available | Positive | 1379536 - 1380291 | 27603.6 |
| esterase | E9D03_RS06260 | Not Available | Negative | 1380288 - 1381037 | 27658.1 |
| biofilm peroxide resistance protein bsma | E9D03_RS06265 | Not Available | Positive | 1381219 - 1381548 | 12066.7 |
| protease activator yjfn | E9D03_RS06270 | Not Available | Positive | 1381697 - 1381972 | 9949.64 |
| isovaleryl-coa dehydrogenase | E9D03_RS06275 | Not Available | Negative | 1382089 - 1383714 | 60555.4 |
| glutathionylspermidine synthase family protein | E9D03_RS06280 | Not Available | Negative | 1383798 - 1384961 | 45036.0 |
| duf1190 domain-containing protein | E9D03_RS06285 | Not Available | Negative | 1384964 - 1385602 | 23358.9 |
| duf350 domain-containing protein | E9D03_RS06290 | Not Available | Negative | 1385612 - 1386010 | 14224.7 |
| yjfk family protein | E9D03_RS06295 | Not Available | Negative | 1386028 - 1386687 | 25095.4 |
| pspa/im30 family protein | E9D03_RS06300 | Not Available | Negative | 1386738 - 1387436 | 25335.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




