Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Putative tail component | E9D03_RS22640 | Not Available | Negative | 4787466 - 4788044 | 21479.6 |
| Hypothetical protein | E9D03_RS22645 | Not Available | Negative | 4788056 - 4788331 | 10131.2 |
| Hypothetical protein | E9D03_RS22650 | Not Available | Negative | 4788324 - 4788647 | 11071.3 |
| Head maturation protease | E9D03_RS22655 | Not Available | Negative | 4788734 - 4790761 | 73450.3 |
| Putative portal protein | E9D03_RS22660 | Not Available | Negative | 4790706 - 4791041 | 12368.3 |
| Portal protein | E9D03_RS22665 | Not Available | Negative | 4791163 - 4792287 | 41996.2 |
| Hypothetical protein | E9D03_RS22670 | Not Available | Negative | 4792215 - 4792427 | 8271.93 |
| Terminase large subunit | E9D03_RS22675 | Not Available | Negative | 4792424 - 4794526 | 78965.0 |
| Terminase small subunit | E9D03_RS22680 | Not Available | Negative | 4794526 - 4795017 | 18544.1 |
| Hypothetical protein | E9D03_RS22685 | Not Available | Negative | 4795692 - 4795844 | 5768.38 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




