Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ymia family putative membrane protein | E9D03_RS06030 | Not Available | Negative | 1342733 - 1342897 | 6232.76 |
| hth-type transcriptional regulator cysb | E9D03_RS06035 | Not Available | Negative | 1343192 - 1344166 | 36152.5 |
| type i dna topoisomerase | E9D03_RS06040 | Not Available | Negative | 1344376 - 1346973 | 97356.0 |
| ycin family protein | E9D03_RS06045 | Not Available | Positive | 1347353 - 1347604 | 9386.17 |
| protease sohb | E9D03_RS06050 | Not Available | Negative | 1347640 - 1348689 | 39384.7 |
| ycik family oxidoreductase | E9D03_RS06055 | Not Available | Positive | 1348909 - 1349667 | 27972.6 |
| cob(i)yrinic acid a,c-diamide adenosyltransferase | E9D03_RS06060 | Not Available | Positive | 1349664 - 1350254 | 22028.2 |
| 23s rrna pseudouridine(2605) synthase rlub | E9D03_RS06065 | Not Available | Negative | 1350294 - 1351166 | 32599.3 |
| duf2207 domain-containing protein | E9D03_RS06070 | Not Available | Negative | 1351379 - 1352962 | 59845.3 |
| threonylcarbamoyl-amp synthase | E9D03_RS06075 | Not Available | Negative | 1352990 - 1353610 | 23213.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




