Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gntr family transcriptional regulator | E9D03_RS05345 | Not Available | Negative | 1194465 - 1195130 | 25225.1 |
| nadph-dependent curcumin/dihydrocurcumin reductase | E9D03_RS05350 | Not Available | Negative | 1195328 - 1196365 | 37611.9 |
| l-methionine sulfoximine/l-methionine sulfone acetyltransferase | E9D03_RS05355 | Not Available | Positive | 1196546 - 1197064 | 19249.7 |
| dmt family transporter | E9D03_RS05360 | Not Available | Positive | 1197061 - 1197510 | 15810.0 |
| ydcy family protein | E9D03_RS05365 | Not Available | Negative | 1197511 - 1197744 | 8800.41 |
| ghot/ortt family toxin | E9D03_RS05370 | Not Available | Negative | 1197830 - 1198003 | 6646.44 |
| stress response membrane protein yncl | E9D03_RS05375 | Not Available | Positive | 1198198 - 1198293 | 3490.44 |
| aminobutyraldehyde dehydrogenase | E9D03_RS05380 | Not Available | Negative | 1198390 - 1199814 | 50903.0 |
| abc transporter permease | E9D03_RS05385 | Not Available | Negative | 1199836 - 1200630 | 28741.6 |
| abc transporter permease | E9D03_RS05390 | Not Available | Negative | 1200620 - 1201561 | 34367.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




