Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| carbonic anhydrase | E9D03_RS05295 | Not Available | Negative | 1180718 - 1181377 | 23765.6 |
| transcriptional regulator cynr | E9D03_RS05300 | Not Available | Positive | 1181487 - 1182386 | 32956.7 |
| cytosine deaminase | E9D03_RS05305 | Not Available | Negative | 1182519 - 1183802 | 47626.9 |
| cytosine permease | E9D03_RS05310 | Not Available | Negative | 1183792 - 1185051 | 43666.3 |
| type vi secretion system tip protein vgrg | E9D03_RS05315 | Not Available | Negative | 1185309 - 1187417 | 78863.0 |
| ynch family protein | E9D03_RS05320 | Not Available | Negative | 1188238 - 1188450 | 8262.62 |
| glutathione s-transferase family protein | E9D03_RS05325 | Not Available | Negative | 1188526 - 1189143 | 23330.0 |
| l-asparagine permease | E9D03_RS05330 | Not Available | Positive | 1189410 - 1190909 | 54236.3 |
| ynce family protein | E9D03_RS05335 | Not Available | Negative | 1191024 - 1192085 | 38670.2 |
| tonb-dependent receptor | E9D03_RS05340 | Not Available | Positive | 1192327 - 1194429 | 77309.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




