Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formaldehyde-responsive transcriptional repressor frmr | E9D03_RS05195 | Not Available | Positive | 1158973 - 1159248 | 10318.3 |
| s-(hydroxymethyl)glutathione dehydrogenase | E9D03_RS05200 | Not Available | Positive | 1159283 - 1160392 | 39335.2 |
| s-formylglutathione hydrolase frmb | E9D03_RS05205 | Not Available | Positive | 1160485 - 1161318 | 31249.9 |
| duf2058 domain-containing protein | E9D03_RS05210 | Not Available | Negative | 1161443 - 1161982 | 19923.8 |
| 3-(3-hydroxy-phenyl)propionate transporter mhpt | E9D03_RS05215 | Not Available | Negative | 1162084 - 1163295 | 41581.5 |
| 4-hydroxy-2-oxovalerate aldolase | E9D03_RS05220 | Not Available | Negative | 1163471 - 1164484 | 36440.6 |
| acetaldehyde dehydrogenase (acetylating) | E9D03_RS05225 | Not Available | Negative | 1164481 - 1165431 | 33588.6 |
| 2-keto-4-pentenoate hydratase | E9D03_RS05230 | Not Available | Negative | 1165428 - 1166237 | 28857.5 |
| 2-hydroxy-6-oxononadienedioate/2-hydroxy-6- oxononatrienedioate hydrolase | E9D03_RS05235 | Not Available | Negative | 1166247 - 1167113 | 31913.2 |
| 2,3-dihydroxyphenylpropionate/2, 3-dihydroxicinnamic acid 1,2-dioxygenase | E9D03_RS05240 | Not Available | Negative | 1167131 - 1168075 | 34198.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




