Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent clp endopeptidase proteolytic subunit clpp | E9D03_RS04795 | Not Available | Negative | 1073600 - 1074223 | 23188.1 |
| trigger factor | E9D03_RS04800 | Not Available | Negative | 1074468 - 1075766 | 48195.4 |
| transcriptional regulator bola | E9D03_RS04805 | Not Available | Negative | 1076110 - 1076427 | 11994.3 |
| lipoprotein | E9D03_RS04810 | Not Available | Positive | 1076732 - 1077310 | 20979.3 |
| muropeptide mfs transporter ampg | E9D03_RS04815 | Not Available | Positive | 1077354 - 1078829 | 53248.3 |
| cytochrome o ubiquinol oxidase subunit ii | E9D03_RS04820 | Not Available | Positive | 1079289 - 1080236 | 34932.2 |
| cytochrome o ubiquinol oxidase subunit i | E9D03_RS04825 | Not Available | Positive | 1080258 - 1082249 | 74372.2 |
| cytochrome o ubiquinol oxidase subunit iii | E9D03_RS04830 | Not Available | Positive | 1082239 - 1082853 | 22652.0 |
| cytochrome o ubiquinol oxidase subunit iv | E9D03_RS04835 | Not Available | Positive | 1082853 - 1083182 | 12030.2 |
| protoheme ix farnesyltransferase | E9D03_RS04840 | Not Available | Positive | 1083194 - 1084084 | 32250.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




