Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | E9D03_RS04690 | Not Available | Positive | 1051636 - 1052106 | 18268.2 |
| cyclic-guanylate-specific phosphodiesterase pdeb | E9D03_RS04695 | Not Available | Positive | 1052270 - 1053820 | 58833.8 |
| duf1428 domain-containing protein | E9D03_RS04700 | Not Available | Negative | 1053862 - 1054215 | 13318.9 |
| mgmt family protein | E9D03_RS04710 | Not Available | Positive | 1054594 - 1054905 | 11488.8 |
| hypothetical protein | E9D03_RS04715 | Not Available | Negative | 1054938 - 1055510 | 19442.3 |
| acyl-coa thioesterase ii | E9D03_RS04720 | Not Available | Positive | 1055728 - 1056588 | 31968.1 |
| ammonium transporter amtb | E9D03_RS04725 | Not Available | Negative | 1056637 - 1057923 | 44517.4 |
| p-ii family nitrogen regulator | E9D03_RS04730 | Not Available | Negative | 1057953 - 1058291 | 12259.9 |
| smdb family multidrug efflux abc transporter permease/atp-binding protein | E9D03_RS04735 | Not Available | Negative | 1058472 - 1060253 | 65226.5 |
| smda family multidrug abc transporter permease/atp-binding protein | E9D03_RS04740 | Not Available | Negative | 1060246 - 1062018 | 66005.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




