Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ig-like domain-containing protein | E9D03_RS04540 | Not Available | Negative | 1011214 - 1015599 | 145646.0 |
| tolc family outer membrane protein | E9D03_RS04545 | Not Available | Negative | 1015702 - 1017057 | 49196.8 |
| amino acid permease | E9D03_RS04550 | Not Available | Negative | 1017395 - 1018687 | 45688.6 |
| glutaminase a | E9D03_RS04555 | Not Available | Negative | 1018690 - 1019622 | 32846.1 |
| copper-exporting p-type atpase copa | E9D03_RS04560 | Not Available | Positive | 1019884 - 1022388 | 88010.5 |
| higa family addiction module antidote protein | E9D03_RS04565 | Not Available | Negative | 1022603 - 1022944 | 13171.8 |
| hypothetical protein | E9D03_RS04570 | Not Available | Positive | 1023082 - 1023876 | 29918.3 |
| cys-trna(pro)/cys-trna(cys) deacylase ybak | E9D03_RS04575 | Not Available | Positive | 1024080 - 1024559 | 17067.8 |
| bifunctional udp-sugar hydrolase/5'-nucleotidase | E9D03_RS04580 | Not Available | Negative | 1024596 - 1026248 | 60734.2 |
| mfs transporter | E9D03_RS04585 | Not Available | Positive | 1026466 - 1027686 | 43312.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




