Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna utilization protein hofp | E9D03_RS04230 | Not Available | Positive | 938018 - 938422 | 15115.1 |
| dna uptake porin hofq | E9D03_RS04235 | Not Available | Positive | 938334 - 939572 | 44746.9 |
| shikimate kinase arok | E9D03_RS04240 | Not Available | Positive | 939973 - 940494 | 19539.2 |
| 3-dehydroquinate synthase | E9D03_RS04245 | Not Available | Positive | 940551 - 941639 | 38886.3 |
| cell division protein damx | E9D03_RS04250 | Not Available | Positive | 941731 - 943017 | 46106.2 |
| adenine-specific dna-methyltransferase | E9D03_RS04255 | Not Available | Positive | 943124 - 943960 | 32101.2 |
| ribulose-phosphate 3-epimerase | E9D03_RS04260 | Not Available | Positive | 943978 - 944655 | 24555.7 |
| phosphoglycolate phosphatase | E9D03_RS04265 | Not Available | Positive | 944648 - 945406 | 27348.7 |
| tryptophan--trna ligase | E9D03_RS04270 | Not Available | Positive | 945399 - 946403 | 37425.9 |
| transcriptional regulator phob | E9D03_RS04275 | Not Available | Negative | 946534 - 947265 | 27836.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




