Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain 389639 SAMN09371778-rid9461513.guided.161 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1323848 bp
Thymine Count
1307626 bp
Guanine Count
1316056 bp
Cytosine Count
1339205 bp
Genome Length
5306567 bp
Protein-coding Genes
4922 genes
Non-Coding Genes
195 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Integrase | E9D03_RS19455 | Not Available | Negative | 4192343 - 4193485 | 43864.6 |
| Regulatory protein ciii | E9D03_RS20245 | Not Available | Positive | 4338153 - 4338233 | 3044.79 |
| Kil protein | E9D03_RS20250 | Not Available | Positive | 4338226 - 4338339 | 4442.47 |
| Hypothetical protein | E9D03_RS20255 | Not Available | Positive | 4338336 - 4338524 | 7478.04 |
| Hypothetical protein | E9D03_RS20260 | Not Available | Positive | 4338533 - 4339213 | 25640.8 |
| Hypothetical protein | E9D03_RS20265 | Not Available | Positive | 4339210 - 4339797 | 21351.2 |
| Abc2 | E9D03_RS20270 | Not Available | Positive | 4339821 - 4340117 | 11268.3 |
| Hypothetical protein | E9D03_RS20275 | Not Available | Positive | 4340128 - 4340418 | 10854.2 |
| Hypothetical protein | E9D03_RS20280 | Not Available | Positive | 4340415 - 4340582 | 6334.85 |
| Hypothetical protein | E9D03_RS20285 | Not Available | Positive | 4340579 - 4341223 | 24670.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |




