Pseudidiomarina gelatinasegens strain R04H25

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Idiomarinaceae

Genus

Pseudidiomarina

Description

Pseudidiomarina gelatinasegens strain R04H25 is characterized by having a single replicon, indicating a streamlined genomic structure that may contribute to its biological efficiency. The strain is cataloged under the accession number RSFE00000000.1, which allows for its identification and further study within scientific databases. As a member of the Pseudidiomarina genus, P. gelatinasegens is likely to exhibit specific metabolic capabilities, particularly in gelatin degradation, suggested by its name. This trait may position the strain as an important player in the degradation of organic materials in marine environments, where gelatinous compounds are prevalent. The ecological implications of Pseudidiomarina gelatinasegens strain R04H25 may extend to nutrient cycling in aquatic ecosystems, particularly in the breakdown of complex organic matter. By efficiently degrading gelatinous substances, this strain could facilitate the recycling of nutrients, thereby supporting microbial diversity and productivity in marine habitats. Understanding the metabolic pathways and ecological roles of such strains can provide insights into their contributions to ecosystem health and stability.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyIdiomarinaceae
GenusPseudidiomarina
SpeciesPseudidiomarina gelatinasegens
Strainstrain R04H25

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudidiomarina gelatinasegens strain R04H25

Gene Summary

Adenine Count

640993 bp

Thymine Count

640407 bp

Guanine Count

579356 bp

Cytosine Count

612297 bp

Genome Length

2474889 bp

Protein-coding Genes

2293 genes

Non-Coding Genes

61 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
helix-turn-helix domain-containing proteinEGC76_09895Not AvailableNegative2059010 - 20592799916.33
transposaseEGC76_09900Not AvailableNegative2059692 - 206003013226.5
hypothetical proteinEGC76_09905Not AvailablePositive2060396 - 206070711206.5
copper chaperone pcu(a)cEGC76_09910Not AvailablePositive2060739 - 206116415417.5
tigr04219 family outer membrane beta-barrel proteinEGC76_09915Not AvailablePositive2061180 - 206192927112.8
duf3299 domain-containing proteinEGC76_09920Not AvailableNegative2061944 - 206242617748.2
abc transporter permeaseEGC76_09925Not AvailableNegative2062426 - 206367945281.0
abc transporter atp-binding proteinEGC76_09930Not AvailableNegative2063676 - 206438326018.0
inorganic diphosphataseEGC76_09935Not AvailableNegative2064389 - 206491919685.5
class 1 fructose-bisphosphataseEGC76_09940Not AvailableNegative2064960 - 206595236522.9

Displaying genes 1961 – 1970 of 2353 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.